Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909773.1_cds_XP_016459891.1_53370
CDS Infomation

[gene=LOC107783438] [db_xref=GeneID:107783438] [protein=ABC transporter C family member 3-like] [protein_id=XP_016459891.1] [location=join(79962..80372,80456..80542,80625..81257,81374..81538,81676..81970,82062..82276,82357..82662,82764..82827,82907..83146,83231..83355)] [gbkey=CDS]
Sequence

ATGAGAGTTGCCATTTGTGGTACAGTTGGTTCAGGAAAATCAAGCTTACTGTCTAGCATT
TTAGGAGAGATGCCCAAATTATCAGGGACTATTAAACTCAGCGGAACGAAAGCTTATGTT
GCACAGTCGCCCTGGATACAGAGTGGAAAGATAGAGGAGAACATATTATTTGGTAAAGAG
ATGCAGAGGGAGAAGTATGATAAAGTTCTTGAAGCGTGCTCCTTAAAGAAAGACCTGGAA
ATTCTCTCTTTTGGCGATCAAACAGTAATAGGGGAGAGAGGCATTAATTTGAGCGGTGGA
CAGAAGCAGAGAATACAGATTGCTCGTGCTCTTTACCAAGATGCTGATGTTTACCTATTT
GATGATCCGTTCAGTGCTGTGGATGCTCATACCGGATCCCATCTCTTCAATGAATGTATA
ATGGGGCTATGGAATTCAAAAACAGTTTTATATGTTACACATCAAGTGGAGTTTTTGCCT
GCTGCGGATTTGATCTTGGTCATGAAAGATGGAAGGATCAGAGAAGCTGGGAAATACAAT
GATCTTCTCAAATTAGGTAGTGACTTCATGGAACTTGTGGGTGCTCACCAAGAAGCTTTA
ACAGCAATTGACACAGTTAAGGGAGAAGCATTGAGAAAGAGTGTGGAAATGACTGGTGAT
AATACAAATGTGCAGAAGGATAAAAAGATTCCAGATGGCCAAAATGGTAAAGTGGATGAT
ATTGTTGGAACAAAGGGACAAATTGTTCAGGAGGAGGAAAGAGAGAAAGGTAGTGTTGGT
TTTGCAATTTACTGGAAATATATAACAACTGCATATGGAGGTGCTCTCGTGCCATTTATG
CTGTTGGCACAAGTTGGTTTTCAGCTCCTTCAAATTGGAAGCAATTATTGGATGGCTTGG
GCAACTCCCGTCTCAAAGAGTGATCCACCTCCTGTTGGGGGTTCTACTCTCATCATTGTA
TATGTTGCTTTAGGAATCGCAAGTGCTTTCTGCATCCTTGCTAGAACCATGCTTCTTGTT
ACCGCTGGATATAAGACAGCCTCATTGCTTTTCCAAAAAATGCATCTTTGCATTTTCCGT
GCTCCAATGTCCTTCTTCGATGCCACACCAAGTGGGCGGATCCTAAACAGAGCATCGACA
GATCAAAGTGCAATTGATCTGAACGTTCCCTTTCAAGTTGGATCCTTTGCCTTCACAATA
ATACAGCTTTTAGGAATTATTGGAGTAATGTCACAAGTTGCATGGCAGGTCTTCATTGTC
TTTATTCCGATCATTGCAGTTTCCATCTGGTTGGAGCAATATTACATACCATCAGCACGA
GAACTGGCACGACTAAATGGGACATGCAAAGCTCCAGTAATACAGCACTTTGCCGAGACA
ATTTCAGGATCAAGCACAATTAGAAGTTTCGATCAGGAATCTAGATTCCAGGACGCAAGT
ATGAAATTGATAGACAATTATTCTCGACCTAAGTTTCACACCGCTGCTGCAATGGAGTGG
CTCTGCATGCGTTTGGATATGCTATCTCTGATCACTTTTGCTTTCTCATTAATTTTCTTG
ATCTCTCTTCCTGTTGGAACAATTGACCCAAGTGTTGCTGGCTTAGCTGTTACATATGGG
CTTAATCTGAACATATTACAAGCTTGGGTTGTTTGGAATCTTTGTATGATGGAAAATAAA
ATTATTTCTGTTGAAAGAATACTTCAGTATACTGCTCTTCCAAGTGAACCTCCTCTTATC
ATAGAATCTAACAGACCAGACCCTAACTGGCCATCTTGTGGAGAGGTTGATTTTAGCAAT
CTTCAGGTCCGATATGCTCCTCACATGCCTCTAGTGTTGCGAGGCCTTACATGCACTTTC
TTTGGTGGAAAGAAGACTGGAATTGTCGGTAGGACAGGCAGCGGTAAATCTACTCTAATA
CAGACCCTCTTCCGCATAGTTGAACCAGCTGCTGGACAAATAAAAATAGATGGTACCAGC
ATCTCCTCAATTGGTCTACATGATCTACGGTCTAGATTGAGTATAATTCCACAGGATCCA
ACTATGTTTGAGGGGACAGTTCGCAGCAACCTAGACCCGCTTGAAGAGTATTCAGATGAA
CAAATTTGGGAGGCGCTCGATAAGTGTCAGCTAGGAGAAGAAGTGAGGAAGAAGGAAGGC
AAACTTTATTCTACAGTATCTGAGAACGGAGAGAACTGGAGTGTAGGCCAAAGGCAGCTG
GTCTGTCTTGGCCGTGTGCTACTGAAAAAGAGCAAGGTCCTGGTCCTTGACGAGGCTACA
GCATCTGTCGACACTGCAACTGATAATCTGATTCAGCAAACTCTAAGGCTGCACTTCTCT
GATTCCACGGTTATAACCATTGCTCATAGGATTACATCTGTGCTTGACAGTGATATGGTC
CTACTATTAGATCATGGGCTCATTGCTGAATACGACACTCCAGCCAGGTTGTTAGAGAAC
GAATCCTCATTGTTTGCTAAGCTCGTGGCAGAGTATAGTATGAGGTCAAATTCAAGTTTT
GAGAATGTTTCAGATACGTGA

Peptide Sequence

PEP ID

XP_016459891.1
PEP Infomation

PREDICTED: ABC transporter C family member 3-like [Nicotiana tabacum]
Sequence

MRVAICGTVGSGKSSLLSSILGEMPKLSGTIKLSGTKAYVAQSPWIQSGKIEENILFGKE
MQREKYDKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADVYLF
DDPFSAVDAHTGSHLFNECIMGLWNSKTVLYVTHQVEFLPAADLILVMKDGRIREAGKYN
DLLKLGSDFMELVGAHQEALTAIDTVKGEALRKSVEMTGDNTNVQKDKKIPDGQNGKVDD
IVGTKGQIVQEEEREKGSVGFAIYWKYITTAYGGALVPFMLLAQVGFQLLQIGSNYWMAW
ATPVSKSDPPPVGGSTLIIVYVALGIASAFCILARTMLLVTAGYKTASLLFQKMHLCIFR
APMSFFDATPSGRILNRASTDQSAIDLNVPFQVGSFAFTIIQLLGIIGVMSQVAWQVFIV
FIPIIAVSIWLEQYYIPSARELARLNGTCKAPVIQHFAETISGSSTIRSFDQESRFQDAS
MKLIDNYSRPKFHTAAAMEWLCMRLDMLSLITFAFSLIFLISLPVGTIDPSVAGLAVTYG
LNLNILQAWVVWNLCMMENKIISVERILQYTALPSEPPLIIESNRPDPNWPSCGEVDFSN
LQVRYAPHMPLVLRGLTCTFFGGKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQIKIDGTS
ISSIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYSDEQIWEALDKCQLGEEVRKKEG
KLYSTVSENGENWSVGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRLHFS
DSTVITIAHRITSVLDSDMVLLLDHGLIAEYDTPARLLENESSLFAKLVAEYSMRSNSSF
ENVSDT

Transcript Sequence

Gene sequence data has not been registered.